Seamus Holden
Co-development of super-resolution microscopy approaches
Started on May, 2019
Website
Email
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ORCID
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Research themes with our lab
Resources
Team members collaborating
Ricardo Henriques
Lucas Von Chamier
MRC-LMCB
Hannah Heil
EMBO Postdoctoral Fellowship
Estibaliz Gómez de Mariscal
EMBO Funded
Pedro Almada
Alumni
Pedro Matos Pereira
Alumni
Romain F. Laine
Alumni
Christoph Spahn
EMBO Short-Term Fellow
Alumni
Publications with our group (see more on Google Scholar)
| DeepBacs: Bacterial image analysis using open-source deep learning approaches Christoph Spahn, Estibaliz Gómez-de-Mariscal, Romain F. Laine, Pedro Matos Pereira, Estibaliz Gómez-de-Mariscal, Lucas von Chamier, Mia Conduit, Mariana Gomes de Pinho, Guillaume Jacquemet, Séamus Holden, Mike Heilemann, Ricardo Henriques Published in bioRxiv, November 2021 (see preprint) |
| FtsZ treadmilling is essential for Z-ring condensation and septal constriction initiation in Bacillus subtilis cell division Kevin D Whitley, Calum Jukes, Nicholas Tregidgo, Eleni Karinou, Pedro Almada, Yann Cesbron, Ricardo Henriques, Cees Dekker, Séamus Holden Published in Nature communications, April 2021 (see publication or preprint) |
| Democratising deep learning for microscopy with ZeroCostDL4Mic Lucas von Chamier, Romain F Laine, Johanna Jukkala, Christoph Spahn, Daniel Krentzel, Elias Nehme, Martina Lerche, Sara Hernández-Pérez, Pieta K Mattila, Eleni Karinou, Séamus Holden, Ahmet Can Solak, Alexander Krull, Tim-Oliver Buchholz, Martin L Jones, Loïc A Royer, Christophe Leterrier, Yoav Shechtman, Florian Jug, Mike Heilemann, Guillaume Jacquemet, Ricardo Henriques Published in Nature communications, April 2021 (see publication) |
| Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software Daniel Sage, Thanh-An Pham, Hazen Babcock, Tomas Lukes, Thomas Pengo, Jerry Chao, Ramraj Velmurugan, Alex Herbert, Anurag Agrawal, Silvia Colabrese, Ann Wheeler, Anna Archetti, Bernd Rieger, Raimund Ober, Guy M Hagen, Jean-Baptiste Sibarita, Jonas Ries, Ricardo Henriques, Michael Unser, Seamus Holden Published in Nature methods, May 2019 (see publication) |